Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs6764125 | chr3:100028549 | A/G | 4.66E-5 | 210 | 16.47 | 17.8 | 4.67 | KM Plot |
| KIRP | rs6764454 | chr3:190104303 | A/G | 0.000122 | 211 | 13.77 | 19.92 | 12.1 | KM Plot |
| KIRP | rs6764957 | chr3:99967168 | C/G | 0.000213 | 214 | 16.47 | 18.47 | 2.63 | KM Plot |
| KIRP | rs6765158 | chr3:99967382 | C/A | 2.1E-5 | 212 | 16.47 | 17.13 | 4.53 | KM Plot |
| KIRP | rs67652222 | chr6:27586220 | C/T | 1.98E-7 | 213 | 16.45 | 15.02 | 9.77 | KM Plot |
| KIRP | rs67662114 | chr6:27932301 | G/A | 4.74E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs67670862 | chr15:58458407 | G/A | 1.25E-5 | 214 | 14.87 | 19.53 | 11.7 | KM Plot |
| KIRP | rs6770670 | chr3:49686682 | T/C | 0.000534 | 214 | 14.13 | 16.97 | 19.53 | KM Plot |
| KIRP | rs6772774 | chr3:99970995 | A/G | 8.89E-6 | 214 | 16.47 | 17.8 | 4.67 | KM Plot |
| KIRP | rs6774538 | chr3:99975514 | C/A | 8.89E-6 | 213 | 16.7 | 17.8 | 4.67 | KM Plot |
| KIRP | rs67837398 | chr5:79932496 | C/T | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
| KIRP | rs67859638 | chr6:27357978 | A/G | 3.23E-7 | 213 | 16.43 | 13.6 | 9.77 | KM Plot |
| KIRP | rs6787142 | chr3:100040510 | A/C | 4.46E-5 | 208 | 16.43 | 18.88 | 4.67 | KM Plot |
| KIRP | rs6787301 | chr3:100012836 | G/A | 3.08E-5 | 211 | 16.7 | 17.8 | 4.67 | KM Plot |
| KIRP | rs6791887 | chr3:99981078 | T/C | 1.27E-5 | 213 | 16.45 | 18.88 | 4.67 | KM Plot |